Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ATAC-seq
82
total RNA-seq
67
single cell RNA-seq
40
ChIP-seq
26
snATAC-seq
4
MeRIP-seq
3
Hi-C
1
pCHi-C
Assay category
129
DNA accessibility
Date released
64
August, 2021
38
May, 2022
11
February, 2023
11
May, 2023
4
March, 2019
1
October, 2017
Available data
102
bed narrowPeak
64
xls
21
bigWig
20
fastq
19
bam
2
bed broadPeak
Organism
129
Homo sapiens
Biosample type
129
tissue
49
primary cell
10
in vitro differentiated cells
Organ
75
kidney
34
pancreas
20
liver
Project
118
AMP
11
T1D
Genome assembly (visualization)
78
GRCh38
41
hg19
Lab
AMP-T2D consortium
75
Katalin Susztak, Upenn
29
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_title!
WGBS
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
129 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
tissue
kidney
75
islet of Langerhans
34
liver
20
Download