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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
218
ChIP-seq
32
DNase-seq
17
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
Assay category
36
DNA accessibility
Date released
30
June, 2019
2
November, 2018
1
February, 2023
1
July, 2019
1
October, 2017
1
October, 2019
Available data
34
bam
34
bigWig
32
bed bed3+
32
bed broadPeak
32
bed narrowPeak
32
bigBed broadPeak
32
bigBed narrowPeak
3
fastq
1
bed bed3
Organism
36
Homo sapiens
Biosample type
31
tissue
5
primary cell
Organ
160
pancreas
156
kidney
122
epithelium
77
heart
57
vasculature
55
blood vessel
49
artery
44
limb
36
brain
34
connective tissue
34
musculature of body
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
8
adipose tissue
3
nerve
2
spleen
2
vein
1
blood
1
bodily fluid
1
pituitary gland
1
skin of body
Project
36
AMP
Genome assembly (visualization)
34
GRCh38
23
hg19
Lab
36
AMP-T2D consortium
BIOSAMPLE
ASSAY
36 results
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DNase-seq
ATAC-seq
tissue
brain
14
1
cerebellum (Hemisphere)
1
1
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
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primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
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