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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
189
Transcription
23
DNA accessibility
Date released
143
May, 2020
40
May, 2022
9
August, 2021
5
December, 2019
5
January, 2019
4
July, 2019
2
October, 2019
1
August, 2017
1
February, 2020
1
February, 2021
1
March, 2020
Available data
180
bigWig
169
tsv
162
bam
23
bed narrowPeak
6
fastq
1
bed bed3
1
bigBed narrowPeak
Organism
212
Homo sapiens
Biosample type
191
tissue
15
cell line
6
primary cell
Organ
555
pancreas
499
connective tissue
404
adipose tissue
234
epithelium
212
liver
135
kidney
119
heart
107
blood vessel
107
vasculature
101
artery
74
bone element
47
eye
21
brain
16
skeleton
15
limb
14
embryo
7
musculature of body
6
nerve
1
blood
1
bodily fluid
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
1
spleen
Project
212
AMP
Genome assembly (visualization)
182
hg19
162
GRCh38
Lab
163
AMP-T2D consortium
40
Karen Mohlke, UNC
9
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
212 results
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total RNA-seq
ATAC-seq
tissue
liver
167
20
right lobe of liver
3
1
cell line
HepG2
14
1
primary cell
hepatocyte
5
Liver fetal (hepatocyte)
1
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