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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
97
total RNA-seq
84
ATAC-seq
70
single cell RNA-seq
47
WGBS
18
DNase-seq
7
Hi-C
6
RRBS
1
FAIRE-seq
1
RNA microarray
Assay category
84
DNA accessibility
Date released
39
May, 2022
14
September, 2018
12
February, 2023
7
August, 2020
5
September, 2017
3
August, 2017
3
September, 2020
1
October, 2019
Available data
39
zippedFastqFolder
35
bed narrowPeak
32
bigWig
32
fastq
23
bam
22
bigBed narrowPeak
Organism
84
Homo sapiens
Biosample type
72
primary cell
cell line
12
tissue
Organ
133
pancreas
84
epithelium
75
kidney
39
heart
38
blood vessel
38
vasculature
37
artery
28
eye
25
connective tissue
22
liver
12
bone element
12
skeleton
8
limb
6
adipose tissue
4
brain
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
49
HPAP
35
AMP
Genome assembly (visualization)
35
hg19
33
GRCh38
Lab
49
Klaus Kaestner, Upenn
35
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
84 results
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ATAC-seq
primary cell
pancreatic alpha cell
35
pancreatic beta cell
23
pancreatic acinar cell
9
pancreatic ductal cell
4
Liver fetal (hepatocyte)
1
tissue
pigmented layer of retina
12
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