Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
901
total RNA-seq
615
ChIP-seq
177
DNase-seq
43
ATAC-seq
16
WGBS
16
small RNA-seq
4
FAIRE-seq
Assay category
43
DNA accessibility
Date released
20
May, 2022
8
October, 2017
6
July, 2019
3
October, 2019
2
August, 2017
2
January, 2018
2
March, 2020
Available data
208
bed narrowPeak
64
bam
64
xls
43
bigWig
29
fastq
5
bed bed3
3
bigBed narrowPeak
2
bed broadPeak
1
tsv
Organism
43
Homo sapiens
Biosample type
78
primary cell
43
tissue
12
in vitro differentiated cells
3
cell line
Organ
21
liver
7
pancreas
4
adipose tissue
4
connective tissue
4
heart
3
blood vessel
3
vasculature
2
artery
2
brain
2
limb
1
musculature of body
1
nerve
1
spleen
Project
43
AMP
Genome assembly (visualization)
41
hg19
18
GRCh38
Lab
22
AMP-T2D consortium
20
Karen Mohlke, UNC
1
Stephen Parker, UMich
BIOSAMPLE
ASSAY
43 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
tissue
liver
20
body of pancreas
4
islet of Langerhans
3
adipose tissue
2
heart left ventricle
2
cerebellum (Hemisphere)
1
coronary artery
1
omental fat pad
1
posterior cingulate cortex
1
right atrium auricular region
1
right lobe of liver
1
skeletal muscle tissue
1
spleen
1
subcutaneous adipose tissue
1
thoracic aorta
1
tibial artery
1
tibial nerve
1
See all biosamples
Download