Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
247
ChIP-seq
152
total RNA-seq
100
single cell RNA-seq
78
ATAC-seq
29
DNase-seq
4
Hi-C
2
small RNA-seq
1
FAIRE-seq
Assay category
78
DNA accessibility
Date released
45
May, 2020
14
September, 2018
7
August, 2020
5
September, 2017
3
August, 2017
3
September, 2020
1
February, 2021
Available data
84
bam
78
bigWig
39
bed narrowPeak
39
zippedFastqFolder
32
fastq
22
bigBed narrowPeak
12
tsv
1
bed bed3
Organism
78
Homo sapiens
Biosample type
78
primary cell
43
tissue
12
in vitro differentiated cells
3
cell line
Organ
32
epithelium
32
pancreas
1
connective tissue
Project
68
AMP
10
HPAP
Genome assembly (visualization)
68
hg19
33
GRCh38
Lab
68
AMP-T2D consortium
10
Klaus Kaestner, Upenn
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
78 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
B cell
2
+ See 25 more…
See all biosamples
Download