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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
243
total RNA-seq
219
ChIP-seq
128
single cell RNA-seq
27
snATAC-seq
17
WGBS
13
ATAC-seq
5
GRO-seq
4
RRBS
1
Hi-C
1
pCHi-C
Assay category
13
DNA accessibility
Date released
7
August, 2020
3
September, 2020
2
October, 2017
1
March, 2019
Available data
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
13
Homo sapiens
Biosample type
10
primary cell
3
tissue
Organ
12
pancreas
10
epithelium
1
brain
Project
10
HPAP
3
AMP
Genome assembly (visualization)
12
GRCh38
1
hg19
Lab
10
Klaus Kaestner, Upenn
1
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
13 results
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ATAC-seq
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
tissue
islet of Langerhans
2
cerebellum (Hemisphere)
1
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