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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
825
ChIP-seq
217
total RNA-seq
127
single cell RNA-seq
47
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
47
DNA accessibility
Date released
18
May, 2022
September, 2018
8
October, 2017
7
August, 2020
5
August, 2017
5
September, 2017
3
September, 2020
1
March, 2019
Available data
264
bed narrowPeak
161
bam
122
bigWig
64
xls
47
fastq
39
zippedFastqFolder
14
tsv
13
bigBed narrowPeak
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
47
Homo sapiens
Biosample type
29
tissue
18
primary cell
Organ
42
pancreas
18
epithelium
2
adipose tissue
2
connective tissue
1
brain
1
liver
1
spleen
Project
37
AMP
10
HPAP
Genome assembly (visualization)
35
hg19
28
GRCh38
Lab
18
Kyle Gaulton, UCSD
17
AMP-T2D consortium
10
Klaus Kaestner, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
month_released!
September, 2018
BIOSAMPLE
ASSAY
47 results
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ATAC-seq
tissue
islet of Langerhans
20
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
right lobe of liver
1
+ See 2 more…
primary cell
pancreatic alpha cell
10
pancreatic beta cell
6
pancreatic acinar cell
2
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