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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1321
total RNA-seq
205
single cell RNA-seq
31
pCHi-C
18
small RNA-seq
14
ATAC-seq
6
WGBS
3
snDrop-seq
2
RNA microarray
Assay category
14
DNA accessibility
Date released
12
February, 2023
2
December, 2019
2
March, 2020
Available data
278
bed narrowPeak
175
bam
136
bigWig
87
txt
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
16
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
2
bed broadPeak
Organism
16
Homo sapiens
Biosample type
12
primary cell
3
tissue
1
cell line
Organ
2
epithelium
2
kidney
2
pancreas
Project
16
AMP
Genome assembly (visualization)
2
hg19
Lab
16
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
2
audit script error
BIOSAMPLE
ASSAY
16 results
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ATAC-seq
RNA microarray
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
tissue
islet of Langerhans
1
kidney interstitium
1
renal glomerulus
1
cell line
EndoC_BH1
1
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