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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
94
ChIP-seq
32
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
single cell RNA-seq
Assay category
32
DNA accessibility
Date released
10
August, 2021
9
February, 2023
5
November, 2019
4
February, 2021
4
October, 2019
Available data
17
bam
17
bed narrowPeak
5
bed bed3
4
bed bed3+
4
bed bedgraph
2
bigBed narrowPeak
2
bigWig
Organism
32
Homo sapiens
Biosample type
148
primary cell
129
tissue
32
in vitro differentiated cells
29
cell line
Organ
15
connective tissue
Project
32
AMP
Genome assembly (visualization)
32
hg19
17
GRCh38
Lab
32
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
9
inconsistent ontology term
month_released!
August, 2017
BIOSAMPLE
ASSAY
32 results
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ATAC-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
7
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
chondrocyte
5
immature adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
preadipocyte
1
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