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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
459
total RNA-seq
125
ChIP-seq
51
ATAC-seq
13
DNase-seq
6
single cell RNA-seq
5
Hi-C
3
pCHi-C
3
small RNA-seq
2
WGBS
1
FAIRE-seq
1
RNA microarray
1
RRBS
Assay category
51
DNA accessibility
Date released
36
February, 2023
8
February, 2021
2
July, 2019
2
October, 2019
August, 2017
1
January, 2018
1
November, 2019
1
October, 2017
Available data
49
bed narrowPeak
13
bam
6
bigWig
1
bigBed narrowPeak
1
fastq
Organism
51
Homo sapiens
Biosample type
43
tissue
8
cell line
Organ
149
pancreas
100
epithelium
75
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
24
connective tissue
22
liver
12
bone element
12
skeleton
8
limb
5
adipose tissue
4
brain
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
51
AMP
Genome assembly (visualization)
48
GRCh38
16
hg19
Lab
51
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
August, 2017
BIOSAMPLE
ASSAY
51 results
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ATAC-seq
tissue
coronary artery
36
adipose tissue
3
adipose tissue(adipose white tissue)
1
omental fat pad
1
thoracic aorta
1
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cell line
smooth muscle cell of the coronary artery
8
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