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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
92
total RNA-seq
91
ATAC-seq
70
single cell RNA-seq
47
WGBS
19
DNase-seq
8
Hi-C
6
MeRIP-seq
6
RRBS
2
Capture-C
1
FAIRE-seq
1
RNA microarray
Assay category
91
DNA accessibility
Date released
39
May, 2022
16
May, 2021
14
September, 2018
February, 2023
7
August, 2020
5
September, 2017
3
August, 2017
3
September, 2020
2
March, 2020
1
November, 2019
1
October, 2019
Available data
39
zippedFastqFolder
34
bigWig
32
fastq
24
bam
24
bed narrowPeak
22
bigBed narrowPeak
1
tsv
Organism
91
Homo sapiens
Biosample type
72
primary cell
19
cell line
Organ
141
pancreas
91
epithelium
75
kidney
23
liver
15
connective tissue
12
heart
11
blood vessel
11
vasculature
10
artery
8
bone element
8
limb
8
skeleton
5
adipose tissue
3
brain
1
blood
1
bodily fluid
1
eye
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
49
HPAP
42
AMP
Genome assembly (visualization)
34
GRCh38
26
hg19
Lab
49
Klaus Kaestner, Upenn
42
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
month_released!
February, 2023
BIOSAMPLE
ASSAY
91 results
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ATAC-seq
primary cell
pancreatic alpha cell
35
pancreatic beta cell
23
pancreatic acinar cell
9
pancreatic ductal cell
4
Liver fetal (hepatocyte)
1
cell line
EndoC_BH1
19
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