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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
total RNA-seq
165
ChIP-seq
34
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
165
DNA binding
34
DNA accessibility
Target of assay
140
histone
140
histone modification
76
broad histone mark
64
narrow histone mark
16
transcription factor
9
control
5
RNA binding protein
Date released
406
November, 2017
301
August, 2017
264
October, 2019
199
May, 2021
150
May, 2020
120
May, 2019
119
August, 2021
103
February, 2023
94
December, 2017
80
April, 2019
77
May, 2022
74
October, 2018
70
November, 2018
46
September, 2018
39
November, 2019
34
December, 2018
31
June, 2019
30
February, 2021
25
January, 2019
24
February, 2018
23
October, 2017
11
May, 2023
11
September, 2017
7
August, 2020
7
March, 2020
6
July, 2019
4
March, 2019
3
January, 2018
3
September, 2020
1
November, 2020
Available data
133
bed narrowPeak
128
bigWig
104
bam
90
tagAlign
Organism
199
Homo sapiens
Biosample type
134
primary cell
48
in vitro differentiated cells
17
cell line
Organ
20
epithelium
20
pancreas
Project
114
AMP
85
T1D
Genome assembly (visualization)
141
hg19
103
GRCh38
Lab
159
Kyle Gaulton, UCSD
40
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
BIOSAMPLE
ASSAY
199 results
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Clear Filters
ChIP-seq
ATAC-seq
primary cell
monocyte
85
13
CD8-positive, alpha-beta T cell
33
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
in vitro differentiated cells
embryonic stem cell
37
5
cardiomyocytes
3
pancreatic PP cell
3
cell line
EndoC_BH1
1
16
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