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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
153
ATAC-seq
140
single cell RNA-seq
100
total RNA-seq
43
ChIP-seq
41
WGBS
28
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
153
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
114
bed narrowPeak
64
xls
39
zippedFastqFolder
28
bam
22
bigWig
18
fastq
Organism
153
Homo sapiens
Biosample type
102
tissue
39
primary cell
12
in vitro differentiated cells
Organ
64
kidney
57
pancreas
39
epithelium
20
liver
2
connective tissue
Project
114
AMP
39
HPAP
Genome assembly (visualization)
74
GRCh38
50
hg19
Lab
64
Katalin Susztak, Upenn
39
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
10
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
153 results
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Clear Filters
ATAC-seq
tissue
kidney
64
liver
20
islet of Langerhans
18
primary cell
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
in vitro differentiated cells
neural progenitor cell
10
adipocyte
1
osteoblast
1
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