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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
767
ChIP-seq
243
total RNA-seq
125
single cell RNA-seq
59
ATAC-seq
27
snATAC-seq
14
WGBS
10
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
Assay category
59
DNA accessibility
Date released
18
May, 2022
14
September, 2018
7
August, 2020
7
October, 2017
5
September, 2017
4
August, 2017
3
September, 2020
1
March, 2019
Available data
270
bed narrowPeak
170
bam
127
bigWig
64
xls
59
fastq
39
zippedFastqFolder
23
bigBed narrowPeak
14
tsv
6
bed bed3
3
bed bedgraph
3
txt
2
bed broadPeak
Organism
59
Homo sapiens
Biosample type
32
primary cell
27
tissue
Organ
56
pancreas
32
epithelium
2
adipose tissue
connective tissue
1
brain
1
liver
1
spleen
Project
49
AMP
10
HPAP
Genome assembly (visualization)
47
hg19
40
GRCh38
Lab
29
AMP-T2D consortium
18
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
59 results
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ATAC-seq
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
tissue
islet of Langerhans
20
body of pancreas
4
cerebellum (Hemisphere)
1
right lobe of liver
1
spleen
1
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