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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
141
single cell RNA-seq
99
total RNA-seq
76
snATAC-seq
50
ATAC-seq
47
WGBS
17
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
3
Hi-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
50
DNA accessibility
Date released
39
May, 2022
11
February, 2023
Available data
39
zippedFastqFolder
Organism
50
Homo sapiens
Biosample type
39
primary cell
11
tissue
Organ
50
pancreas
39
epithelium
Project
AMP
39
HPAP
11
T1D
Genome assembly (visualization)
GRCh38
Lab
39
Klaus Kaestner, Upenn
11
Kyle Gaulton, UCSD
organ_slims!
nerve
assembly!
GRCh38
award.project!
AMP
BIOSAMPLE
ASSAY
50 results
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ATAC-seq
primary cell
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
tissue
islet of Langerhans
11
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