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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
205
DNase-seq
76
ChIP-seq
1
ATAC-seq
Assay category
76
DNA binding
Target of assay
40
histone
40
histone modification
36
transcription factor
21
broad histone mark
19
narrow histone mark
7
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
55
November, 2017
18
August, 2017
3
October, 2017
Available data
1254
bigWig
1224
bam
1217
bed narrowPeak
767
bigBed narrowPeak
652
fastq
246
tagAlign
76
bed broadPeak
62
bigBed broadPeak
53
bed bed3+
1
tagAlign bed3+
Organism
70
Homo sapiens
Biosample type
44
cell line
18
primary cell
14
tissue
Organ
44
liver
14
brain
6
pancreas
4
epithelium
4
vasculature
2
blood vessel
Project
76
AMP
Genome assembly (visualization)
114
hg19
76
GRCh38
Lab
76
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
assay_title!
WGBS
BIOSAMPLE
ASSAY
76 results
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ChIP-seq
cell line
HepG2
44
primary cell
skeletal muscle myoblast
12
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
tissue
pancreas
6
brain
3
middle frontal area 46
2
caudate nucleus
1
cingulate gyrus
1
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