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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
total RNA-seq
40
ChIP-seq
18
snATAC-seq
17
pCHi-C
16
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
40
DNA binding
Target of assay
20
histone
20
histone modification
12
transcription factor
10
broad histone mark
10
narrow histone mark
8
control
5
RNA binding protein
Date released
40
May, 2021
Available data
117
bigWig
bed narrowPeak
84
bam
84
tagAlign
Organism
40
Homo sapiens
Biosample type
37
in vitro differentiated cells
3
primary cell
Project
40
AMP
Genome assembly (visualization)
3
hg19
Lab
502
AMP-T2D consortium
40
Kyle Gaulton, UCSD
4
Bing Ren, UCSD
assay_title!
shRNA RNA-seq
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
in vitro differentiated cells
embryonic stem cell
37
primary cell
CD8-positive, alpha-beta T cell
3
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