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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
29
ChIP-seq
8
ATAC-seq
6
DNase-seq
4
Hi-C
1
FAIRE-seq
1
RRBS
Assay category
29
DNA binding
Target of assay
17
histone
17
histone modification
9
broad histone mark
8
narrow histone mark
6
control
6
transcription factor
2
RNA binding protein
Date released
17
October, 2019
6
February, 2021
6
November, 2017
Available data
29
bam
22
bigWig
18
bed narrowPeak
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
6
fastq
6
tagAlign
Organism
29
Homo sapiens
Biosample type
tissue
23
primary cell
6
cell line
Organ
397
liver
129
epithelium
101
pancreas
79
connective tissue
60
blood
60
bodily fluid
29
vasculature
26
blood vessel
25
kidney
22
embryo
17
vein
11
heart
10
musculature of body
9
brain
6
artery
3
eye
Project
29
AMP
Genome assembly (visualization)
22
hg19
18
GRCh38
Lab
29
AMP-T2D consortium
biosample_type!
tissue
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
cell line
smooth muscle cell of the coronary artery
6
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