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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
DNase-seq
34
ChIP-seq
5
Hi-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
34
DNA binding
Target of assay
17
histone
17
histone modification
13
transcription factor
9
narrow histone mark
8
broad histone mark
4
control
2
RNA binding protein
Date released
26
August, 2017
3
August, 2021
3
December, 2017
2
September, 2017
Available data
1432
bam
1235
bigWig
1175
bed narrowPeak
787
bigBed narrowPeak
737
fastq
358
tagAlign
114
bed broadPeak
79
bigBed broadPeak
34
bed bed3+
3
tar
1
tagAlign bed3+
Organism
34
Homo sapiens
Biosample type
28
tissue
in vitro differentiated cells
3
primary cell
3
stem cell
Organ
21
pancreas
6
liver
4
adipose tissue
4
connective tissue
3
epithelium
Project
34
AMP
Genome assembly (visualization)
34
GRCh38
34
hg19
Lab
34
AMP-T2D consortium
Audit category:
14
missing controlled_by
Audit category:
2
inconsistent control read length
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
21
white adipose tissue
4
liver
3
primary cell
hepatocyte
3
stem cell
hESC
3
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