Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
155
ChIP-seq
97
total RNA-seq
27
ATAC-seq
10
DNase-seq
3
RRBS
2
FAIRE-seq
Assay category
155
DNA binding
Target of assay
79
transcription factor
73
histone modification
72
histone
44
broad histone mark
28
narrow histone mark
15
RNA binding protein
3
control
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
64
August, 2017
36
December, 2017
31
October, 2018
7
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
2
September, 2017
Available data
524
bigWig
505
bam
503
bed narrowPeak
325
bigBed narrowPeak
155
fastq
105
tagAlign
35
bed broadPeak
28
bed bed3+
1
tagAlign bed3+
Organism
149
Homo sapiens
Biosample type
362
cell line
155
tissue
102
in vitro differentiated cells
82
primary cell
3
stem cell
Organ
61
pancreas
58
liver
18
adipose tissue
18
connective tissue
12
spleen
6
brain
Project
155
AMP
Genome assembly (visualization)
155
GRCh38
155
hg19
Lab
155
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
25
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
155 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
51
body of pancreas
25
islet of Langerhans
23
pancreas
13
spleen
12
white adipose tissue
12
right lobe of liver
7
brain
6
omental fat pad
3
subcutaneous adipose tissue
2
adipose tissue
1
See all biosamples
Download