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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
15
total RNA-seq
4
GRO-seq
1
DNase-seq
1
pCHi-C
Assay category
120
DNA binding
Target of assay
65
histone
65
histone modification
33
narrow histone mark
33
transcription factor
31
broad histone mark
22
control
6
RNA binding protein
3
chromatin remodeller
Date released
53
August, 2017
43
December, 2017
24
February, 2018
Available data
146
bam
120
fastq
115
bigWig
110
bed narrowPeak
40
tagAlign
19
bed bed3+
14
bigBed narrowPeak
Organism
120
Homo sapiens
Biosample type
420
cell line
220
tissue
120
in vitro differentiated cells
94
primary cell
3
stem cell
Organ
53
connective tissue
22
embryo
19
epithelium
15
liver
Project
120
AMP
Genome assembly (visualization)
102
GRCh38
102
hg19
Lab
120
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
6
missing controlled_by
Audit category:
17
inconsistent control read length
BIOSAMPLE
ASSAY
120 results
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ChIP-seq
in vitro differentiated cells
adipocyte
53
pancreatic endoderm
18
hepatocyte
15
definitive endodermal cell
8
primitive gut cell
8
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