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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
97
DNA binding
Target of assay
71
histone
71
histone modification
45
broad histone mark
26
narrow histone mark
22
control
9
transcription factor
RNA binding protein
Date released
47
May, 2019
40
October, 2019
6
February, 2021
4
November, 2017
Available data
97
bam
74
bigWig
70
bed narrowPeak
66
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
4
fastq
Organism
97
Homo sapiens
Biosample type
70
tissue
21
primary cell
6
cell line
Organ
494
liver
215
brain
203
pancreas
143
connective tissue
123
heart
121
epithelium
97
vasculature
95
blood vessel
68
adipose tissue
66
limb
50
blood
50
bodily fluid
49
kidney
39
musculature of body
35
nerve
33
artery
22
embryo
20
spleen
17
vein
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
97
AMP
Genome assembly (visualization)
74
hg19
70
GRCh38
Lab
97
AMP-T2D consortium
month_released!
September, 2017
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
tissue
tibial artery
23
ascending aorta
15
thoracic aorta
15
aorta
13
coronary artery
4
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
cell line
smooth muscle cell of the coronary artery
6
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