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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
119
ChIP-seq
5
total RNA-seq
Assay category
119
DNA binding
Target of assay
56
transcription factor
38
histone
38
histone modification
25
control
19
broad histone mark
19
narrow histone mark
10
RNA binding protein
9
chromatin remodeller
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
119
bam
119
fastq
93
bed narrowPeak
93
bigWig
71
bigBed narrowPeak
15
bed bed3+
Organism
119
Homo sapiens
Biosample type
55
tissue
43
in vitro differentiated cells
18
cell line
3
stem cell
Organ
63
liver
19
epithelium
18
blood
18
bodily fluid
13
embryo
7
spleen
Project
119
AMP
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
119
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
119 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
spleen
7
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
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cell line
GM12878
18
stem cell
hESC
3
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