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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
pCHi-C
15
total RNA-seq
10
Hi-C
4
ATAC-seq
3
ChIP-seq
Assay category
10
3D chromatin structure
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
406
November, 2017
296
August, 2017
247
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
46
August, 2021
35
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
November, 2019
15
October, 2017
13
March, 2020
8
February, 2021
8
July, 2019
6
September, 2017
3
October, 2022
1
March, 2019
1
March, 2023
Available data
10
bedpe bed3+
10
hic
3
bam
3
bed narrowPeak
3
bigWig
Organism
13
Homo sapiens
Biosample type
9
tissue
2
in vitro differentiated cells
1
cell line
1
primary cell
Organ
4
pancreas
2
blood vessel
2
epithelium
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
10
AMP
3
T1D
Genome assembly (visualization)
13
hg19
3
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
13 results
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Hi-C
ChIP-seq
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
EndoC_BH1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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