Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
113
ChIP-seq
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
113
DNA binding
Target of assay
84
histone
84
histone modification
50
broad histone mark
34
narrow histone mark
15
transcription factor
14
control
9
RNA binding protein
Date released
57
April, 2019
40
May, 2024
May, 2019
6
February, 2021
5
June, 2019
5
October, 2019
Available data
99
bed narrowPeak
99
bigWig
72
bam
49
bigBed narrowPeak
6
tagAlign
Organism
113
Homo sapiens
Biosample type
102
tissue
6
cell line
5
primary cell
Organ
552
liver
216
pancreas
brain
153
connective tissue
124
epithelium
113
heart
73
adipose tissue
60
blood
60
bodily fluid
59
limb
52
vasculature
49
blood vessel
47
kidney
35
nerve
32
musculature of body
29
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
113
AMP
Genome assembly (visualization)
98
GRCh38
59
hg19
Lab
73
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
organ_slims!
brain
month_released!
May, 2019
BIOSAMPLE
ASSAY
113 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
left cardiac atrium
40
heart left ventricle
35
heart
14
heart right ventricle
13
cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
5
Download