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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
74
ChIP-seq
7
ATAC-seq
6
WGBS
3
small RNA-seq
2
DNase-seq
2
pCHi-C
1
RNA microarray
Assay category
74
DNA binding
Target of assay
33
histone
33
histone modification
24
control
20
broad histone mark
17
transcription factor
13
narrow histone mark
5
RNA binding protein
Date released
50
August, 2017
23
October, 2018
1
October, 2019
Available data
38
bam
37
fastq
20
bigWig
9
tagAlign
8
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
1
bed broadPeak
Organism
74
Homo sapiens
Biosample type
74
tissue
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
74
AMP
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
74
AMP-T2D consortium
Audit category:
12
missing controlled_by
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
adipose tissue
2
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