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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
61
total RNA-seq
46
ATAC-seq
9
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Assay category
99
DNA binding
1
DNA accessibility
Target of assay
70
histone
70
histone modification
45
broad histone mark
25
narrow histone mark
21
control
8
transcription factor
4
RNA binding protein
Date released
50
May, 2019
41
October, 2019
6
February, 2021
3
November, 2017
Available data
100
bam
77
bigWig
74
bed narrowPeak
70
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
3
fastq
1
tar
Organism
100
Homo sapiens
Biosample type
73
tissue
21
primary cell
6
cell line
Organ
552
liver
220
pancreas
219
brain
153
connective tissue
130
epithelium
103
vasculature
100
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
53
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
18
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
100
AMP
Genome assembly (visualization)
77
hg19
73
GRCh38
Lab
100
AMP-T2D consortium
BIOSAMPLE
ASSAY
100 results
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ChIP-seq
FAIRE-seq
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
primary cell
endothelial cell of umbilical vein
17
1
brain microvascular endothelial cell
3
cell line
smooth muscle cell of the coronary artery
6
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