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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
61
total RNA-seq
46
ATAC-seq
9
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Assay category
99
DNA binding
Target of assay
70
histone
70
histone modification
45
broad histone mark
25
narrow histone mark
21
control
8
transcription factor
4
RNA binding protein
Date released
50
May, 2019
40
October, 2019
6
February, 2021
3
November, 2017
1
March, 2020
Available data
99
bam
76
bigWig
73
bed narrowPeak
69
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
3
fastq
1
tsv
Organism
100
Homo sapiens
Biosample type
74
tissue
20
primary cell
6
cell line
Organ
555
liver
220
brain
219
pancreas
158
connective tissue
129
epithelium
103
vasculature
100
blood vessel
97
heart
75
adipose tissue
66
limb
60
blood
60
bodily fluid
54
kidney
40
musculature of body
35
nerve
34
artery
22
embryo
21
spleen
17
vein
9
eye
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone element
1
bone marrow
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
stomach
1
urinary bladder
Project
100
AMP
Genome assembly (visualization)
76
hg19
73
GRCh38
Lab
100
AMP-T2D consortium
BIOSAMPLE
ASSAY
100 results
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Clear Filters
ChIP-seq
pCHi-C
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
1
coronary artery
5
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
cell line
smooth muscle cell of the coronary artery
6
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