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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
159
ChIP-seq
61
total RNA-seq
47
ATAC-seq
9
DNase-seq
8
snATAC-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Assay category
159
DNA binding
Target of assay
71
histone
71
histone modification
59
transcription factor
45
broad histone mark
27
control
26
narrow histone mark
14
RNA binding protein
10
chromatin remodeller
Date released
50
May, 2019
40
October, 2019
27
December, 2018
18
January, 2019
15
November, 2018
6
February, 2021
3
November, 2017
Available data
159
bam
130
bigWig
127
bed narrowPeak
123
bigBed narrowPeak
63
fastq
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
Organism
159
Homo sapiens
Biosample type
73
tissue
66
cell line
20
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
159
AMP
Genome assembly (visualization)
130
hg19
127
GRCh38
Lab
159
AMP-T2D consortium
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
159 results
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Clear Filters
ChIP-seq
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
cell line
GM12878
60
smooth muscle cell of the coronary artery
6
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
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