Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
34
DNase-seq
6
Hi-C
6
total RNA-seq
5
RRBS
3
WGBS
2
ATAC-seq
2
pCHi-C
2
small RNA-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
59
DNA binding
Target of assay
39
histone
39
histone modification
24
broad histone mark
15
narrow histone mark
14
control
6
transcription factor
3
other context
3
other post-translational modification
Date released
22
August, 2017
10
June, 2019
7
December, 2018
7
January, 2019
7
May, 2019
6
November, 2018
Available data
39
bed narrowPeak
39
bigWig
37
bam
26
bigBed narrowPeak
20
fastq
15
tagAlign
13
bed broadPeak
Organism
59
Homo sapiens
Biosample type
49
tissue
10
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
59
AMP
Genome assembly (visualization)
39
hg19
25
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
59 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
skeletal muscle tissue
22
spleen
20
muscle of leg
7
primary cell
skeletal muscle satellite cell
8
skeletal muscle cell
2
Download