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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
403
total RNA-seq
108
ChIP-seq
7
ATAC-seq
6
WGBS
4
DNase-seq
3
small RNA-seq
2
pCHi-C
1
RNA microarray
Assay category
108
DNA binding
Target of assay
56
histone
56
histone modification
36
broad histone mark
35
control
20
narrow histone mark
17
transcription factor
5
RNA binding protein
Date released
50
August, 2017
35
October, 2019
23
October, 2018
Available data
72
bam
43
bigWig
37
fastq
31
bed narrowPeak
30
bigBed narrowPeak
8
tagAlign
4
bed bed3+
1
bed broadPeak
Organism
108
Homo sapiens
Biosample type
108
tissue
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
108
AMP
Genome assembly (visualization)
43
hg19
42
GRCh38
Lab
108
AMP-T2D consortium
Audit category:
12
missing controlled_by
BIOSAMPLE
ASSAY
108 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
tibial nerve
35
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
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