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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
93
DNA binding
Target of assay
71
histone
71
histone modification
45
broad histone mark
26
narrow histone mark
22
control
transcription factor
5
RNA binding protein
Date released
47
May, 2019
40
October, 2019
4
November, 2017
2
February, 2021
Available data
93
bam
70
bigWig
66
bed narrowPeak
66
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
fastq
2
tagAlign
Organism
93
Homo sapiens
Biosample type
70
tissue
21
primary cell
2
cell line
Organ
215
brain
214
liver
199
pancreas
120
epithelium
113
connective tissue
93
vasculature
91
blood vessel
82
heart
66
limb
56
adipose tissue
42
kidney
39
musculature of body
35
nerve
29
artery
19
embryo
17
vein
14
spleen
9
blood
9
bodily fluid
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
93
AMP
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
93
AMP-T2D consortium
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ChIP-seq
tissue
tibial artery
23
ascending aorta
15
thoracic aorta
15
aorta
13
coronary artery
4
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
cell line
smooth muscle cell of the coronary artery
2
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