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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
76
ATAC-seq
74
total RNA-seq
42
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
42
DNA binding
Target of assay
20
histone
20
histone modification
12
control
11
narrow histone mark
11
transcription factor
9
broad histone mark
RNA binding protein
Date released
369
November, 2017
288
August, 2017
242
October, 2019
160
May, 2021
115
May, 2019
90
December, 2017
76
April, 2019
63
October, 2018
50
May, 2020
49
November, 2018
42
August, 2021
32
December, 2018
32
September, 2018
27
June, 2019
24
February, 2018
19
January, 2019
15
October, 2017
12
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
29
bed narrowPeak
29
bigWig
24
bam
24
tagAlign
3
bed bed3+
Organism
42
Homo sapiens
Biosample type
21
in vitro differentiated cells
17
cell line
4
primary cell
Organ
21
liver
4
epithelium
Project
42
AMP
Genome assembly (visualization)
28
hg19
16
GRCh38
Lab
25
AMP-T2D consortium
17
Bing Ren, UCSD
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
42 results
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ChIP-seq
in vitro differentiated cells
neural progenitor cell
21
cell line
HepG2
17
primary cell
hepatocyte
4
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