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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
DNase-seq
75
ATAC-seq
64
single cell RNA-seq
60
total RNA-seq
37
ChIP-seq
6
snATAC-seq
4
RRBS
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
37
DNA binding
Target of assay
30
histone
30
histone modification
broad histone mark
15
narrow histone mark
12
control
10
transcription factor
7
recombinant protein
3
RNA binding protein
Date released
18
October, 2019
13
April, 2019
3
June, 2019
3
May, 2019
Available data
37
bam
24
bed narrowPeak
24
bigWig
12
bigBed narrowPeak
Organism
37
Homo sapiens
Biosample type
17
tissue
10
cell line
10
primary cell
Organ
510
liver
148
brain
140
pancreas
109
connective tissue
85
epithelium
60
blood
60
bodily fluid
57
heart
57
vasculature
54
blood vessel
53
adipose tissue
37
kidney
32
limb
20
artery
19
musculature of body
19
nerve
18
embryo
16
spleen
8
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
37
AMP
Genome assembly (visualization)
24
GRCh38
24
hg19
Lab
37
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
tissue
kidney
17
cell line
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
epithelial cell of proximal tubule
7
kidney epithelial cell
3
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