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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
76
ATAC-seq
74
total RNA-seq
23
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
23
DNA binding
Target of assay
histone
20
histone modification
12
control
11
narrow histone mark
11
transcription factor
9
broad histone mark
1
RNA binding protein
Date released
318
November, 2017
98
August, 2017
70
November, 2018
63
December, 2017
46
October, 2019
44
October, 2018
34
December, 2018
28
May, 2019
25
May, 2021
23
August, 2021
23
May, 2020
20
April, 2019
18
January, 2019
12
June, 2019
8
February, 2018
8
February, 2021
6
September, 2017
3
November, 2019
3
October, 2017
Available data
11
bed narrowPeak
11
bigWig
8
bam
8
tagAlign
Organism
23
Homo sapiens
Biosample type
15
cell line
7
in vitro differentiated cells
1
primary cell
Organ
16
liver
1
epithelium
Project
23
AMP
Genome assembly (visualization)
11
hg19
Lab
15
Bing Ren, UCSD
8
AMP-T2D consortium
target.investigated_as!
histone
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
cell line
HepG2
15
in vitro differentiated cells
neural progenitor cell
7
primary cell
hepatocyte
1
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