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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
72
total RNA-seq
69
ChIP-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
69
DNA binding
Target of assay
62
histone
62
histone modification
37
broad histone mark
narrow histone mark
20
control
12
transcription factor
6
RNA binding protein
Date released
42
April, 2019
15
May, 2019
6
February, 2021
3
June, 2019
3
October, 2019
Available data
69
bam
49
bed narrowPeak
49
bigWig
42
bigBed narrowPeak
6
tagAlign
Organism
69
Homo sapiens
Biosample type
60
tissue
6
cell line
3
primary cell
Organ
492
liver
145
pancreas
120
connective tissue
101
brain
80
epithelium
76
vasculature
74
blood vessel
69
heart
61
adipose tissue
59
blood
59
bodily fluid
51
limb
37
kidney
28
artery
27
nerve
26
musculature of body
18
spleen
14
embryo
11
vein
2
eye
Project
69
AMP
Genome assembly (visualization)
49
GRCh38
49
hg19
Lab
69
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
tissue
heart left ventricle
26
heart
10
heart right ventricle
9
right atrium auricular region
8
right cardiac atrium
4
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cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
3
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