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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
Assay category
123
DNA binding
Target of assay
237
histone
237
histone modification
122
broad histone mark
115
narrow histone mark
32
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
66
May, 2021
17
August, 2017
17
September, 2018
12
October, 2019
8
June, 2019
2
May, 2019
1
August, 2021
Available data
119
bigWig
113
bed narrowPeak
101
bam
51
tagAlign
34
fastq
22
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
1
bed bed3+
Organism
123
Homo sapiens
Biosample type
305
tissue
123
primary cell
59
in vitro differentiated cells
49
cell line
1
stem cell
Organ
31
epithelium
27
pancreas
9
blood vessel
9
vasculature
9
vein
5
kidney
4
connective tissue
4
musculature of body
1
liver
Project
79
AMP
44
T1D
Genome assembly (visualization)
119
hg19
97
GRCh38
Lab
64
Kyle Gaulton, UCSD
59
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
123 results
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ChIP-seq
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
skeletal muscle myoblast
7
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