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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
ChIP-seq
Assay category
125
DNA binding
Target of assay
125
histone modification
124
histone
64
broad histone mark
59
narrow histone mark
47
transcription factor
39
control
8
RNA binding protein
3
chromatin remodeller
Date released
156
October, 2019
125
August, 2017
92
May, 2019
60
April, 2019
55
May, 2021
35
May, 2024
32
September, 2018
31
December, 2017
30
October, 2018
21
November, 2017
19
June, 2019
16
February, 2018
10
November, 2019
7
January, 2019
4
August, 2021
3
March, 2020
Available data
123
bigWig
108
bed narrowPeak
103
bam
103
fastq
tagAlign
37
bed broadPeak
30
bigBed narrowPeak
12
bed bed3+
11
bigBed broadPeak
Organism
125
Homo sapiens
Biosample type
73
tissue
27
primary cell
25
in vitro differentiated cells
Organ
52
pancreas
50
connective tissue
25
adipose tissue
16
liver
14
epithelium
6
musculature of body
Project
125
AMP
Genome assembly (visualization)
86
GRCh38
86
hg19
Lab
125
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
125 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
24
islet of Langerhans
20
liver
16
pancreas
6
skeletal muscle tissue
6
+ See 1 more…
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
7
pancreatic beta cell
7
skeletal muscle myoblast
1
in vitro differentiated cells
adipocyte
25
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