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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1659
ChIP-seq
1241
total RNA-seq
ATAC-seq
217
single cell RNA-seq
212
DNase-seq
87
RNA microarray
40
pCHi-C
28
WGBS
26
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
5
DNA accessibility
1
DNA methylation
Date released
2
July, 2019
1
August, 2017
1
May, 2021
1
November, 2018
1
October, 2019
Available data
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
2
fastq
1
tar
Organism
6
Homo sapiens
Biosample type
4
tissue
2
primary cell
Organ
2
pancreas
1
blood vessel
1
brain
1
epithelium
1
kidney
1
vasculature
1
vein
Project
6
AMP
Genome assembly (visualization)
5
hg19
Lab
6
AMP-T2D consortium
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
6 results
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FAIRE-seq
DNAme array
tissue
frontal cortex
1
islet of Langerhans
1
kidney
1
pancreas
1
primary cell
endothelial cell of umbilical vein
1
monocyte
1
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