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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
32
DNA accessibility
Date released
24
June, 2019
5
October, 2019
2
August, 2017
1
November, 2020
Available data
30
bam
30
bed narrowPeak
30
bigBed narrowPeak
30
bigWig
28
bed broadPeak
28
bigBed broadPeak
27
bed bed3+
1
fastq
1
tar
Organism
32
Homo sapiens
Biosample type
182
tissue
32
primary cell
2
cell line
1
in vitro differentiated cells
Organ
19
epithelium
12
kidney
7
vasculature
6
connective tissue
5
blood vessel
5
brain
3
heart
3
vein
2
liver
1
eye
1
musculature of body
Project
32
AMP
Genome assembly (visualization)
27
GRCh38
23
hg19
Lab
32
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
32 results
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DNase-seq
FAIRE-seq
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
1
kidney tubule cell
3
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
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