Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
867
ChIP-seq
260
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
178
DNA accessibility
27
DNA methylation
Date released
163
June, 2019
15
November, 2018
12
July, 2019
11
August, 2017
4
October, 2019
Available data
194
bam
193
bigWig
177
bed narrowPeak
177
bigBed narrowPeak
176
bed bed3+
176
bed broadPeak
176
bigBed broadPeak
20
fastq
16
bed bedMethyl
16
bigBed bedMethyl
Organism
205
Homo sapiens
Biosample type
205
tissue
78
primary cell
3
cell line
1
in vitro differentiated cells
Organ
68
kidney
37
limb
35
heart
33
musculature of body
27
brain
18
ureter
11
pancreas
8
adipose tissue
8
connective tissue
8
liver
7
blood vessel
7
vasculature
4
artery
3
eye
3
spleen
2
nerve
Project
205
AMP
Genome assembly (visualization)
193
GRCh38
161
hg19
Lab
205
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
205 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
WGBS
tissue
heart
18
1
muscle of arm
17
brain
14
muscle of leg
13
1
kidney
13
+ See 44 more…
See all biosamples
Download