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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
76
total RNA-seq
19
ATAC-seq
7
DNase-seq
4
single cell RNA-seq
3
pCHi-C
2
Capture-C
1
Hi-C
1
RRBS
Assay category
7
DNA accessibility
4
Transcription
Date released
5
June, 2019
2
April, 2018
2
July, 2018
1
August, 2017
1
November, 2020
Available data
11
bam
11
bigWig
7
bed broadPeak
7
bed narrowPeak
7
bigBed broadPeak
7
bigBed narrowPeak
6
bed bed3+
4
fastq
4
tsv
Organism
11
Homo sapiens
Biosample type
10
primary cell
1
in vitro differentiated cells
Organ
145
kidney
123
heart
89
epithelium
82
pancreas
36
limb
35
brain
34
musculature of body
18
ureter
17
vasculature
15
blood vessel
13
connective tissue
9
lung
7
liver
6
artery
4
eye
adipose tissue
2
nerve
2
vein
1
spleen
Project
11
AMP
Genome assembly (visualization)
11
GRCh38
10
hg19
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
11 results
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DNase-seq
single cell RNA-seq
primary cell
pancreatic stellate cell
4
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
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