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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
33
DNase-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
33
DNA accessibility
6
Transcription
Date released
33
June, 2019
2
February, 2020
2
July, 2019
2
March, 2020
Available data
37
bam
37
bigWig
33
bed bed3+
33
bed broadPeak
33
bed narrowPeak
33
bigBed broadPeak
33
bigBed narrowPeak
6
tsv
Organism
39
Homo sapiens
Biosample type
37
tissue
2
primary cell
Organ
483
connective tissue
411
pancreas
400
adipose tissue
195
liver
150
epithelium
141
kidney
102
heart
72
vasculature
70
blood vessel
62
bone element
60
artery
49
brain
43
limb
39
musculature of body
23
eye
18
ureter
14
embryo
7
nerve
4
skeleton
2
vein
1
pericardium
1
spinal cord
1
spleen
Project
39
AMP
Genome assembly (visualization)
37
GRCh38
37
hg19
Lab
39
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
39 results
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DNase-seq
total RNA-seq
tissue
muscle of arm
17
muscle of leg
13
psoas muscle
2
forelimb muscle
1
gastrocnemius medialis
1
+ See 3 more…
primary cell
skeletal muscle cell
1
skeletal muscle satellite cell
1
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