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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
259
ChIP-seq
245
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
27
DNase-seq
17
pCHi-C
10
RRBS
6
Hi-C
2
small RNA-seq
1
DNAme array
Assay category
27
DNA accessibility
Date released
22
June, 2019
2
August, 2017
2
October, 2019
1
November, 2020
Available data
25
bam
25
bed narrowPeak
25
bigBed narrowPeak
25
bigWig
24
bed broadPeak
24
bigBed broadPeak
23
bed bed3+
1
fastq
Organism
27
Homo sapiens
Biosample type
173
tissue
27
primary cell
2
cell line
1
in vitro differentiated cells
Organ
18
epithelium
12
kidney
6
connective tissue
6
vasculature
5
brain
blood vessel
3
heart
2
liver
2
vein
1
eye
1
musculature of body
Project
27
AMP
Genome assembly (visualization)
23
GRCh38
19
hg19
Lab
27
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
27 results
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DNase-seq
primary cell
cardiac fibroblast
3
kidney tubule cell
3
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
skeletal muscle myoblast
2
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