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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
530
total RNA-seq
187
ChIP-seq
70
ATAC-seq
13
DNase-seq
6
WGBS
6
single cell RNA-seq
5
pCHi-C
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
13
DNA accessibility
Date released
8
June, 2019
2
October, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
13
bam
13
bed broadPeak
13
bed narrowPeak
13
bigBed broadPeak
13
bigBed narrowPeak
13
bigWig
12
bed bed3+
2
fastq
Organism
13
Homo sapiens
Biosample type
6
primary cell
6
tissue
1
in vitro differentiated cells
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
vein
1
spleen
Project
13
AMP
Genome assembly (visualization)
13
GRCh38
12
hg19
Lab
13
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
13 results
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DNase-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
coronary artery
2
omental fat pad
2
tibial artery
2
in vitro differentiated cells
adipocyte
1
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