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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
262
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
29
DNase-seq
17
pCHi-C
10
RRBS
8
Hi-C
2
small RNA-seq
1
DNAme array
Assay category
29
DNA accessibility
Date released
24
June, 2019
2
August, 2017
2
October, 2019
1
November, 2020
Available data
27
bam
27
bed narrowPeak
27
bigBed narrowPeak
27
bigWig
26
bed broadPeak
26
bigBed broadPeak
25
bed bed3+
1
fastq
Organism
29
Homo sapiens
Biosample type
178
tissue
29
primary cell
2
cell line
1
in vitro differentiated cells
Organ
18
epithelium
12
kidney
6
connective tissue
6
vasculature
5
brain
4
blood vessel
3
heart
2
liver
vein
1
eye
1
musculature of body
Project
29
AMP
Genome assembly (visualization)
25
GRCh38
20
hg19
Lab
29
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
29 results
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DNase-seq
primary cell
cardiac fibroblast
3
kidney tubule cell
3
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
skeletal muscle myoblast
2
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