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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
453
total RNA-seq
252
ChIP-seq
197
ATAC-seq
82
single cell RNA-seq
51
WGBS
12
DNase-seq
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
12
DNA accessibility
Date released
6
June, 2019
3
October, 2019
2
November, 2018
1
August, 2017
Available data
12
bam
12
bed narrowPeak
12
bigBed narrowPeak
12
bigWig
11
bed bed3+
11
bed broadPeak
11
bigBed broadPeak
3
fastq
Organism
12
Homo sapiens
Biosample type
11
tissue
1
cell line
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
12
AMP
Genome assembly (visualization)
12
GRCh38
10
hg19
Lab
12
AMP-T2D consortium
BIOSAMPLE
ASSAY
12 results
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DNase-seq
tissue
body of pancreas
4
coronary artery
2
pancreas
2
tibial artery
2
islet of Langerhans
1
cell line
Panc1
1
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