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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
215
ChIP-seq
31
DNase-seq
17
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
single cell RNA-seq
2
Hi-C
2
RRBS
2
pCHi-C
1
FAIRE-seq
Assay category
31
DNA accessibility
Date released
29
June, 2019
2
November, 2018
Available data
31
bam
31
bed bed3+
31
bed broadPeak
31
bed narrowPeak
31
bigBed broadPeak
31
bigBed narrowPeak
31
bigWig
2
fastq
Organism
31
Homo sapiens
Biosample type
27
tissue
4
primary cell
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
31
AMP
Genome assembly (visualization)
31
GRCh38
21
hg19
Lab
31
AMP-T2D consortium
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
31 results
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DNase-seq
tissue
brain
14
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
choroid plexus epithelial cell
1
See all biosamples
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