Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
129
ChIP-seq
103
ATAC-seq
70
single cell RNA-seq
47
WGBS
19
DNase-seq
8
Hi-C
6
MeRIP-seq
6
RRBS
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
19
DNA accessibility
Date released
14
June, 2019
5
October, 2019
2
August, 2021
Available data
17
bam
17
bed narrowPeak
17
bigBed narrowPeak
17
bigWig
16
bed bed3+
16
bed broadPeak
16
bigBed broadPeak
Organism
21
Homo sapiens
Biosample type
18
primary cell
3
cell line
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
21
epithelium
18
ureter
11
connective tissue
11
vasculature
10
pancreas
9
blood vessel
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
21
AMP
Genome assembly (visualization)
17
GRCh38
11
hg19
Lab
21
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
21 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
Capture-C
primary cell
kidney tubule cell
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
brain microvascular endothelial cell
1
+ See 8 more…
cell line
EndoC_BH1
2
glomerular visceral epithelial cell
1
See all biosamples
Download